Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937946.1_cds_XP_016482994.1_74158
CDS Infomation

[gene=LOC107803744] [db_xref=GeneID:107803744] [protein=probable disease resistance protein At4g33300] [partial=3'] [protein_id=XP_016482994.1] [location=join(11570..11844,12377..12783,13012..13421,13520..13875,13986..14191,14471..>15123)] [gbkey=CDS]
Sequence

ATGGCGGTAACGGACTTTTTCGCCGGCGAAATCGCCACCGAACTCCTAAAACACCTCCTA
GCCATAGTCCGAAAATCCACCTTCTGCCGTTCAACCGCCGAGCAGCTCATCGTCGACATT
AACGGTCTCCTTCCAATCATCCAAGAAATCAAACAAACTGGCGTTGAACTTTCACAGACA
CGTCAGCGTCAGCTCGATGACTTCTCGAAGATTCTACAAGATGGGTATGAACTTGCCGGA
AAAGTTCTCAACTCTGGCCGTTGGAACGTCTACAGGAACCTACAGCTGGCAAGGAAGATG
GAGAGGCTGGAGAAAAGAGTAGGGAGGTTCATGCAAGTTACAATGCAAGCTCATGTACTA
GCTGATGTTCATCACGTTAGGTTTAATATGGAACAGAGATTTGATGTTCTTGAACATAGG
CTTAAAGCTATAAAGATTGGAGTTGACGACGGTGGTGGTGGTGGAGGGTGTTTAGGGAAA
GCTGTGAAAAGAATGGAAGAGGATGAGAAATGGTTTGAGTATAGTTTTGTAAGTTTAGGT
GCTGGGATTGAGTTGGGGAAGAGGAAAGTGAAGGAGATGTTAATGGGTAAAGAAGATAGG
GGTGTGTTTGAGATTTGCGGAATTGGGGGTATTGGCAAGACCACCTTGGCTAAAGAGATT
TGTAAAGATGATCAAGTTAAAAGTTATTTCAAGGACAAGATTTTCTTTTTCACTGTTTCT
CAATCTCCAAATGTGGAGCAATTGAGGAAAACGATTTGGGAAAAGATATCAGGGTGCAAT
CTTCACAGTTATGGACGTGCGGAGATTTTGCCCCAGTGGAACCTACAGTACCAATGGAAC
TCGAACTCTACAGTCCCTGTACTCTTGATTCTTGATGATGTTTGGTCCCTCTCTGTGCTA
GAGCCGTTAATTCTCAAAATTCCCGGCTGCAAGATCCTAGTTGTGTCGCGCATTAAGTTC
CCTCCATCGGTTATTGACTGTGTTTATGATTTAGAGCTATTAAGGGAAGATGAAGCTATG
TCCTTATTTTGCCATTTTGCTTTTGGACATAATTCCATTCCGCGTGGTTTCAATCATAAG
CTTGTCAAAAAGGTTGTGGAGGAATGTGAAGGGCTTCCGTTGGCACTTAAGGTCATTGGA
TCTTCATTAAAGGGAAAGCCTGAGATGTTCTGGACAAGTGCGAAAAACAGATTATCACAA
AGCCAACCTGTCGGCGAGTCTCATGAACTGCAGTTGCTTGAGCGAATGAAATTGAGTATT
GACTGTTTGCCTGATAAGGTGAGAGAGTGTTTCCTCGACTTGGGTGCTTTTCCAGAAGAC
AAAAGGATTCCTCTTGATGTTCTAATTAACATGTGGGTGGAGCTACATGATATTGATGAG
GAAGAGGCTTTTCACATTCTTGTTGAACTTTCAGACAAAAATCTTCTAAATCTAGTGAAA
GATGCACGAGCTGGAGATATGTACACCAGTTACTATGAGATATCGGTGTCCCAACATGAT
GTCTTACGAGACCTAGCTATTCATGTGAGCAACCGTGGGGATGTAAATCAGAGAAGGCAA
TTGGTCATGCCGAGAAGAGATACAAGGTTGCCAAAAGAATGGGAAAGAAATATGGATGAA
CCTTTCAACGCACGAGTTATTTCTTTGCATACAGATGAAATGAGAGAAATGGACTGGTTC
AGAATGGATTGCCCGAAAGCTGAAGTACTGATTCTCAATTTTTCGTCATCTGAGTACTTT
TTGCCTCCTTTCCTGGAAAACATGCCTAAGCTAAGGGCATTGATAGTCATAAACTATAGT
GCCTCCAATGCAGTTCTTCATAACATGTCTGTCTTTGGTAATTTAACCAACTTGAGAAGC
CTTTGGTTTGAGAAGATATCCGTCACTCACCTGTCCGACTCCACAAATCCTCTCAATAAC
TTGCGAAAAATATCACTAATACTTTGTGACATGAAAAACAACCTAGATGAATCATTTGTA
GACCTCCCTGGTTTGTTCCCACAGCTCTCAGAGTTCACAATGGATCATTGCATCAACTTC
AATAAACTGCCGTCAAGTATTTGCCAGTTGCATAAGCTCAAAAGCCTTGGTATCACTAAT
TGCGATAGTCTTTATGAACTTCCATCTGATTTAGGTGAATTACAAGCTCTACAAGTTTTA
AGGATATACGCCTGCCCGCATCTAAAAAAGCTTCCTCCCGGAATTGGTCATCTGGTAAAC
TTAAAGTATCTTGACATTTCTCAATGTATTGGTTTGAGATGTCTCCCTGAGGCTATCGGG
TGCTGCAGAAACTTGGAGAAAATTGAT

Peptide Sequence

PEP ID

XP_016482994.1
PEP Infomation

PREDICTED: probable disease resistance protein At4g33300, partial [Nicotiana tabacum]
Sequence

MAVTDFFAGEIATELLKHLLAIVRKSTFCRSTAEQLIVDINGLLPIIQEIKQTGVELSQT
RQRQLDDFSKILQDGYELAGKVLNSGRWNVYRNLQLARKMERLEKRVGRFMQVTMQAHVL
ADVHHVRFNMEQRFDVLEHRLKAIKIGVDDGGGGGGCLGKAVKRMEEDEKWFEYSFVSLG
AGIELGKRKVKEMLMGKEDRGVFEICGIGGIGKTTLAKEICKDDQVKSYFKDKIFFFTVS
QSPNVEQLRKTIWEKISGCNLHSYGRAEILPQWNLQYQWNSNSTVPVLLILDDVWSLSVL
EPLILKIPGCKILVVSRIKFPPSVIDCVYDLELLREDEAMSLFCHFAFGHNSIPRGFNHK
LVKKVVEECEGLPLALKVIGSSLKGKPEMFWTSAKNRLSQSQPVGESHELQLLERMKLSI
DCLPDKVRECFLDLGAFPEDKRIPLDVLINMWVELHDIDEEEAFHILVELSDKNLLNLVK
DARAGDMYTSYYEISVSQHDVLRDLAIHVSNRGDVNQRRQLVMPRRDTRLPKEWERNMDE
PFNARVISLHTDEMREMDWFRMDCPKAEVLILNFSSSEYFLPPFLENMPKLRALIVINYS
ASNAVLHNMSVFGNLTNLRSLWFEKISVTHLSDSTNPLNNLRKISLILCDMKNNLDESFV
DLPGLFPQLSEFTMDHCINFNKLPSSICQLHKLKSLGITNCDSLYELPSDLGELQALQVL
RIYACPHLKKLPPGIGHLVNLKYLDISQCIGLRCLPEAIGCCRNLEKID

Transcript Sequence

Gene sequence data has not been registered.